Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs73701144 chr7:64105275 C/T 0 174 22.57 21.98 2.4 KM Plot
UCEC rs73733550 chr6:43423420 G/A 0.000111 170 22.7 17.82 11.53 KM Plot
UCEC rs73907192 chr20:40303077 C/T 4.39E-6 172 22.2 23.18 11.53 KM Plot
UCEC rs73959752 chr2:98242427 G/A 5.63E-10 167 26.27 18.67 2.4 KM Plot
UCEC rs73959769 chr2:98288549 A/G 2.67E-10 173 25.67 18.88 2.4 KM Plot
UCEC rs73963109 chr2:98352623 G/A 8.22E-13 167 22.67 20.55 2.4 KM Plot
UCEC rs74064108 chr14:75383636 G/A 3.52E-5 171 22.8 18.33 1.67 KM Plot
UCEC rs74064442 chr14:75373210 G/A 2.6E-5 172 22.9 17.7 1.67 KM Plot
UCEC rs74372523 chr16:3698200 A/G 1.02E-11 170 22.57 22.63 2.3 KM Plot
UCEC rs74502901 chr3:47967119 A/G 6.44E-6 174 22.63 20.13 11.53 KM Plot
UCEC rs74506941 chr14:73381527 C/T 4.39E-7 168 22.7 21.32 10.33 KM Plot
UCEC rs74906935 chr16:3587326 T/G 3.09E-12 169 22.57 23.82 2.3 KM Plot
UCEC rs74942150 chr7:20643839 A/C 0 172 22.7 20.13 4.33 KM Plot
UCEC rs74958374 chr2:116830098 A/G 2.72E-5 174 22.6 22.58 5.15 KM Plot
UCEC rs74989588 chr7:20656250 C/G 0 173 22.67 20.13 4.33 KM Plot